BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014A04SP1|AL426620
(765 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1683 1514 0.0
>3x_Contig1683
Length = 16378
Score = 1514 bits (763), Expect = 0.0
Identities = 764/765 (99%)
Strand = Plus / Minus
Query: 1 gtcctttctgaccaacatgtaaaccttggaaccatatttggtcaagaattgagcttcttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9045 gtcctttctgaccaacatgtaaaccttggaaccatatttggtcaagaattgagcttcttc 8986
Query: 61 acaagcagagtcaccaccaccgataacagccaatggcttgtttctgaagattggaacagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8985 acaagcagagtcaccaccaccgataacagccaatggcttgtttctgaagattggaacagc 8926
Query: 121 accatcacaaacagcacaagctgaaataccttgttgccagtaagtttcttcaccaggcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8925 accatcacaaacagcacaagctgaaataccttgttgccagtaagtttcttcaccaggcaa 8866
Query: 181 gtgcaaacgcttggctgaagcaccagtagacaagataatggcatctgtggtctcaggttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8865 gtgcaaacgcttggctgaagcaccagtagacaagataatggcatctgtggtctcaggttc 8806
Query: 241 ttgatcctcgttaaactcagtccagaacttgaaaggtctagaagaaagatcaacctttga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8805 ttgatcctcgttaaactcagtccagaacttgaaaggtctagaagaaagatcaacctttga 8746
Query: 301 aacagtttcagtgataacatcggtaccgaacttgatagattgagccttcattctatccat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8745 aacagtttcagtgataacatcggtaccgaacttgatagattgagccttcattctatccat 8686
Query: 361 caattcactaccagtcaaaccatctgggaagccggggaaattttcaatttcagtggtggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8685 caattcactaccagtcaaaccatctgggaagccggggaaattttcaatttcagtggtggt 8626
Query: 421 agtcaattgaccaccagcagcaataccattggccatgaaaccttcgtacaaagtaggttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8625 agtcaattgaccaccagcagcaataccattggccatgaaaccttcgtacaaagtaggttt 8566
Query: 481 gatctctgctctagccaagtaaatggcagcagtgtgggcagctgggccggacccaataat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8565 gatctctgctctagccaagtaaatggcagcagtgtgggcagctgggccggacccaataat 8506
Query: 541 tgtraccttgtgatgaaccattctgtagaatatattactctcgttgatatttctaaaaaa 600
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8505 tgtaaccttgtgatgaaccattctgtagaatatattactctcgttgatatttctaaaaaa 8446
Query: 601 ccctcttaatgatgataatcgtcctaatgtactatttctcactaaaagcatacaatagga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8445 ccctcttaatgatgataatcgtcctaatgtactatttctcactaaaagcatacaatagga 8386
Query: 661 aatctggtatctataatatttcttaatgcgacaacaagtagcaaggcgacagagaataac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8385 aatctggtatctataatatttcttaatgcgacaacaagtagcaaggcgacagagaataac 8326
Query: 721 agttcaatacagattgctatttgtaaattcacatatatatatact 765
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8325 agttcaatacagattgctatttgtaaattcacatatatatatact 8281
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8260
Number of Sequences: 1807
Number of extensions: 8260
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 765
length of database: 10,358,551
effective HSP length: 16
effective length of query: 749
effective length of database: 10,329,639
effective search space: 7736899611
effective search space used: 7736899611
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)